View source for REFERENCES

| '''[[Foraminifera]]''' | '''[[VirtuaLab]]''' | '''[[OUR PUBLICATIONS|VirtuaLab PUBLICATIONS]]''' |



== [[VirtuaLab]] references ==

# Ackerly, S. C. 1989. Kinematics of accretionary shell growth, with examples from brachiopods and molluscs. Paleobiology 15:147–164.
#Alexander, S.P., Banner, F.T., 1984. The functional relationship between skeleton and cytoplasm in ''Haynesina germanica'' (Ehrenberg). Journal of Foraminiferal Research 14, 159– 170.
#Anderson, O.R., Lee, J.J., Faber Jr., W.W., 1991. Collection, maintenance and culture methods for the study of living foraminifera. In: Lee, J.J., Anderson, O.R. (Eds.), Biology of Foraminifera. Academic Press, Harcourt Brace Javanovich,London, pp. 335–357.
#Arnold, Z.M., 1964. Biological observations on the foraminifera ''Spiroloculina hyalina'' Schulze. University of California Publications in Zoology 72, 1– 93.
#Austin, H. A., Austin, W. E. N. and Paterson, D. M., 2005. Extracellular cracking and content removal of the benthic diatom ''Pleurosigma angulatum'' (Quekett) by the benthic foraminifera ''Haynesina germanica'' (Ehrenberg). Marine Micropaleontology 57: 68-73.
#Banner, F.T., Culver, S.J., 1978. Quaternary ''Haynesina'' n. gen. and Palaeogene ''Protelphidium'' Haynes; their morphology, affinities and distribution. Journal of Foraminiferal Research 8, 177– 207.
# Berger, W. H. 1969. Planktonic foraminifera: basic morphology and ecologic implications. Journal of Paleontology 6:1369–1383.
#Bernhard, J.M., Bowser, S.S., 1999. Benthic foraminifera of dysoxic sediments: chloroplast sequestration and functional morphology. Earth-Science Reviews 46, 149–165.
# Brasier, M. D. 1980. Microfossils. Allen & Unwin, London. 
# Brasier, M. D. 1982. Foraminiferid architectural history; a review using the MinLOC and PI methods. Journal of Micropalaeontology 1:95–105.
# Brummer, G. J. A., Ch. Hemleben, and M. Spindler. 1986. Planktonic foraminiferal ontogeny and new perspectives for micropaleontology. Nature 319:50–52.
#Cedhagen, T., 1991. Retention of chloroplasts and bathymetric distribution in the sublittoral foraminiferan ''Nonionellina labradorica''. Ophelia 33, 17–30.
#Correia, M.J., Lee, J.J., 2002. Fine structure of the plastids retained by the foraminifera ''Elphidium excavatum'' (Terquem). Symbiosis 32, 15– 26.
#Correia, M.J., Lee, J.J., 2000. Chloroplast retention by ''Elphidium excavatum'' (Terquem). Is it a selective process? Symbiosis 29, 343– 355.
# De Renzi, M. 1988. Shell coiling in some larger foraminifera: general comments and problems, Paleobiology 14:387–400.
# De Renzi, M. 1995. Theoretical morphology of logistic coiling exemplified by tests of genus Alveolina (larger foraminifera). Neues Jahrbuch für Geologie und Paläontologie. Abhandlungen 195:241–251.
# Fowler D. R., H. Meinhardt, and P. Prusinkiewicz. 1992. Modeling seashells. Computer Graphics 26:379–387.
#Gooday, A.J., Bernhard, J.M., Bowser, S.S., 1995. The taxonomy and ecology of ''Crithionina delacai'' sp., an abundant large agglutinated foraminifera from explorers cove, Antarctica. Journal of Foraminiferal Research 25, 290–298.
# Gravel, B.E. et al. 2004. The use of artificial shells for exploring shell preference i marine hermit crab Pagurus longicarpus (Say). Ann. Zool. Finnici, 41: 477-485 [http://www.sekj.org/PDF/anz41-free/anz41-477.pdf  '''PDF''']
#Hamm, C.E., Merkel, R., Springer, O., Jurkojc, P., Maler, C., Prechtel, K., Smetacek, V., 2003. Architecture and material properties of diatom shells provided effective mechanical protection. Nature 421, 841– 843.
# Hammer, Ø. 1998. Regulation of astogeny in halysitid tabulates. Acta Palaeontologica Polonica 43:635–651
# Hemleben, C., M. Spindler, and O. R. Anderson. 1989. Modern planktonic Foraminifera. Springer-Verlag, New York.
# Hohenegger, J. 1999. Larger foraminifera-microscopical greenhouses indicating shallow-water tropical and subtropical environments in the present and past. Kagoshima University Research Center for the Pacific Islands, Occasional Papers 32:19–45.
# Holbourn, A., W. Kuhnt, and J. Erbacher. 2001. Benthic foraminifers from Lower Albian black shales (Site 1049, ODP Leg 171): evidence for a non "uniformitarian" record. Journal of Foraminiferal Research 31: 60–74.
# Hottinger, L. 1978. Comparative Anatomy of Elementary Shell Structures in Selected Larger Foraminifera. Pp. 203–266 in R.H. Hedley and C.G. Adams, eds. Foraminifera. Volume 3. Academic Press, London.
# Hottinger, L. 1986. Construction, structure, and function of foraminiferal shells. In B. S. C. Leadbeater and R. Riding, eds. Biomineralization in lower plants and animals. The Systematics Association, Special Volume 30:222–235. Clarendon Press, Oxford.
# Hottinger, L. 2000. Functional morphology of benthic foraminiferal shells, envelopes of cells beyond measure. Micropaleontology 46, supplement no. 1:57–86.
# Kaandorp, J. A. 1994. A formal description of radiate accretive growth. Journal of Theoretical Biology 166:149–161.
# Kaandorp, J., and J. E. Kuebler. 2001. Algorithmic beauty of seaweeds, sponges and corals. Springer-Verlag, Heidelberg. 
#Lee, J.J., 1980. Nutrition and physiology of the foraminifera. In: Levandowsky, M.L., Hunter, S.H. (Eds.), Biochemistry and Physiology of Protozoa. Academic Press, London, pp. 43– 66.
#Lee, J.J., McEnery, M., Pierce, S., Freudenthal, H.D., Muller, W.A., 1966. Tracer experiments in feeding littoral foraminifera. Journal of Protozoology 13, 659–670.
# Lindenmayer, A. 1968. Mathematical models for cellular interactions in development, I & II. Journal of Theoretical Biology 18:280–315.
# Lipps, J.H. 1993. Fossil Prokaryotes and Protists, Blackwell, Boston.
# Loeblich, A.R., and H. Tappan. 1987. Foraminiferal Genera and their Classification. Van Nostrand Reinhold, New York.
#Lopez, E., 1979. Algal chloroplasts in the protoplasm of three species of benthic foraminifera: taxonomic affinity, viability and persistence. Marine Biology 53, 201– 211.
# Łabaj P., Topa P., Tyszka J. & Alda W., 2003: 2D and 3D numerical models of the growth of foraminiferal shells. Lecture Notes in Computer Science (LNCS) 2657, Springer-Verlag Berlin Heidelberg, 669–678. [http://www.wodzu.v24.pl/text/out/2Dand3D_ICCS_2003.pdf '''PDF''']
# McGhee, Jr., G. R. 1999. Theoretical Morphology. The Concept and its Application. Perspectives in Paleobiology and Earth History, Columbia University Press, New York.
#Moodley, L., Boschker, H.T.S., Middelburg, J.J., Pel, R., Herman, P.M.J., deDechere, E., Heip, C.H.R., 2000. Ecological significance of benthic foraminifera: 13C labelling experiments. Marine Ecology. Progress Series 202, 259–289.
#Murray, J.W., 1963. Ecological experiments on foraminiferida. Journal of the Marine Biological Association of the United Kingdom 43, 621– 642.
# Okamoto, T. 1988. Analysis of heteromorphy ammonoids by differential geometry. Palaeontology 31:35–52.
# Opalach, A., and M. P. Gascuel, eds, 1995. Introduction to Modelling and Animation using Implicit Surfaces. Computer Graphics International'95, Course Notes no. 3, Leeds, UK.
# Prusinkiewicz, P., and A. Lindenmayer. 1990. The Algorithmic Beauty of Plants. Springer-Verlag, New York.
# Raup, D. M. 1961. The geometry of coiling in gastropods. Proceedings of National Academy of Science (USA) 47:602–609. [http://www.pnas.org/cgi/reprint/47/4/602 '''PDF''']
# Raup, D.M., 1962: Computer as aid in describing form in gastropod shells. Science, 138:150-152.
# Raup, D. M. 1966. Geometric analysis of shell coiling: General problems. Journal of Paleontology 40:1178–1190.
# Raup, D. M., and A. Michelson. 1965. Theoretical morphology of the coiled shell. Science 147:1294–1295.
# Raup, D.M. & S.M. Stanley. 1971, 1978. Principles of Paleontology. WH Freeman & Co., 481+ pp.
#Raven, J.A., Waite, A.M., 2004. The evolution of silicification in diatoms: inescapable sinking and sinking as escape? New Phytologist 162, 45– 61.
# Rhumbler, L. 1909. Die Foraminiferen (Thalamophoren) der Plankton-Expedition der Humboldt-Stiftung, Lipsius & Tischer, Kiel. 
# Scott, G.H. 1974. Biometry of the foraminiferal shell. Pp. 55–151 in R. H. Hedley and C.G. Adams, eds. Foraminifera. Volume 1. Academic Press, London.
# Seilacher, A. 1991. Self-organizing mechanisms in morphogenesis and evolution. Pp. 251–271 in Schmidt-Kittler N., and K. Vogel, eds. Constructional morphology and evolution. Springer-Verlag, Berlin.
# Signes, M., J. Bijma, C. Hemleben, and R. Ott. 1993. A model for planktic foraminiferal shell growth. Paleobiology 19:71–91.
# Stearns, S. C. 1992. The Evolution of Life Histories. Oxford University Press, Oxford.
# Stroustrup, B. 1997. The C++ Programming Language. 3rd ed. Addison-Wesley Longman Inc, Murray, N. Jersey.
# Thomson, D’A. W. 1919. On Growth and Form. The Complete Revised Edition, 1992, Dover Publications Inc., New York.
# [[Paweł TOPA|Topa, P.]] & [[Jarosław TYSZKA|Tyszka, J.]], 2002: Local minimization paradigm in numerical modelling of foraminiferal shells. [http://www.springerlink.com/(fj1ceg45gjxxga55qwaneird)/app/home/contribution.asp?referrer=parent&backto=issue,9,109;journal,1560,3334;linkingpublicationresults,1:105633,1 Lecture Notes in Computer Science (LNCS)] 2329, Springer-Verlag, 97–106. [[Topa & Tyszka 2002|'''Abstract''' and '''Full text''']]
# Tyszka, J. 2004. Analysis of test ontogenesis (ATO) in small foraminifera: implications from ''Pseudonodosinella''. In Bubik M., and M.A. Kaminski, eds. Proceedings of the Seventh International Workshop on Agglutinated Foraminifera. Grzybowski Foundation Special Publication 8:471–483. Grzybowski Foundation, Kraków, London.
# [[Jarosław TYSZKA|Tyszka, J.]], 2006: [[Tyszka 2006|Morphospace of foraminiferal shells: results from the moving reference model]]. [http://www.tandf.co.uk/journals/titles/00241164.asp Lethaia], [http://www.journalsonline.tandf.co.uk/(vcfdxf455rpl4f55i32a03vt)/app/home/issue.asp?referrer=parent&backto=journal,1,25;linkingpublicationresults,1:105669,1 vol. 39 (1):] 1-12. '''[[Tyszka 2006|Abstract and Preprint]]'''
# Tyszka J. & Topa P., [http://www.wodzu.v24.pl/index.php?page=article Łabaj P.], Alda W., 2004: Nowa metoda modelowania morfogenezy otwornic [Theoretical morphology of foraminiferal shells: proposal of a new modeling method]. [http://www.pgi.gov.pl/index.php?option=articles&Itemid=3&topid=10 Przegląd Geologiczny], vol. 52, nr 1, Warszawa, str. 80–83 (in Polish with English summary) [http://www.pgi.gov.pl/pdf/pg_2004_01_10a.pdf '''PDF''']
# Tyszka J. & Topa, P., 2005: A new approach to modeling of foraminiferal shells. [http://www.paleosoc.org/paleobio.htm Paleobiology], vol. 31 no. 3: 526–541. '''[[Tyszka & Topa 2005|Abstract and Full text]]'''
# Tyszka, J. & Topa, P. & Saczka, K., 2005:  State-of-the-art in modelling of foraminiferal shells: searching for an emergent model. W: Tyszka, J., Oliwkiewicz-Miklasińska, M., Gedl, P. & Kaminski, M. A., [http://www.ing.pan.pl/stud4www/124tom.html Methods and Applications in Micropalaeontology], [http://www.ing.pan.pl/stud4www/index.html Studia Geologica Polonica], [http://www.ing.pan.pl/stud4www/124tom.html 124]: 143–157.  [http://www.ing.pan.pl/stud4www/124_pdf/SGP124_143-157.pdf '''PDF''']
# Ubukata, T., Tanabe, K.,  Shigeta, Y., Haruyoshi Maeda, H., Mapes, R.H., 2008: Piggyback whorls: A new theoretical morphologic model reveals constructional linkages among morphological characters in ammonoids. [http://app.pan.pl/ Acta Palaeontologica Polonica] 53 (1), 2008: 113-128 - [http://app.pan.pl/acta53/app53-113.pdf '''PDF''']
#Ward, J.N., Pond, D.W., Murray, J.W., 2003. Feeding of benthic foraminifera on diatoms and sewage-derived organic matter: an experimental application of lipid biomarker techniques. Marine Environmental Research 56, 515– 530.
# Webb, L. P., and A. R. C. Swan. 1996. Estimation of parameters of foraminiferal test geometry by image analysis. Paleontology 39:471–475.
# Woo, M., J. Neider, and T. Davis. 1997. OpenGL Programming guide. Addison-Wesley Developers, Reading, Mass.